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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921645.1_cds_XP_016470544.1_62982
CDS Infomation

[gene=LOC107792818] [db_xref=GeneID:107792818] [protein=E3 ubiquitin-protein ligase Topors-like isoform X2] [protein_id=XP_016470544.1] [location=complement(join(27049..27061,28593..28828,29027..29084,29164..29301,29455..29771))] [gbkey=CDS]
Sequence

ATGGACTCGAGATTTAAGCGAATTGTCAATGCTGTAGTCGGGAAATCATGTCCAATATGC
CTGAGCCGGTTACACCATCGGAAAGCAGCGGTTATTATCCCATGTATGCACGCCTACTGC
ATCGACTGCATCCGCAGATGGAGCCATATGAAGCGAAAATGCCCTCTCTGTATCTCCGAC
TTTGATTCATGGTTCTCTAGAATCAGTTTCTCCTCCGGGACCTTTAAGAAAGAGAAATTA
TCAGCTCCTAACGAGACTAAGAAATTACGCTTAGGGTTTGCATCATCTAGGTCGAGAGAT
CGTTTGGTGGACCAAAGAGCGATTAGGAGAAGGAGAGACGAGCTGAATGGTTTTGGCTCC
AGAACGAGGCCGTTCCCAAGGCGGCGATCCTTTGATCAGATTGGAGCTTCAAATTCATAT
GATATTAACAGGAGAATAATTCACTGGCGTGCTAGTATATATGAAGAGAGATTGCAGGCT
GTTCGGTTTTCATCCAAATATTGTCTTGTGCAGCGCATGGATAATAGGAGTGCCAAAGAA
AAGATGTTACAGAGAATAGAACCTTGGATAAGAAGGGAGCTGCAGGCTATACTGGGGGAT
CCAGATCCGTCCATTATCGTCCATGTTGTTACCTCACTTTTTATCTCCGAAAATACACAT
TCAACACAACAGTATGCCGGAGATGATTTTCTTGCGCCGTTGCGACCCTTCTTGCATGAA
CATGCTGAAATGTTTTGGCACGAACTGAGGGTGGGGATGTAA

Peptide Sequence

PEP ID

XP_016470544.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase Topors-like isoform X2 [Nicotiana tabacum]
Sequence

MDSRFKRIVNAVVGKSCPICLSRLHHRKAAVIIPCMHAYCIDCIRRWSHMKRKCPLCISD
FDSWFSRISFSSGTFKKEKLSAPNETKKLRLGFASSRSRDRLVDQRAIRRRRDELNGFGS
RTRPFPRRRSFDQIGASNSYDINRRIIHWRASIYEERLQAVRFSSKYCLVQRMDNRSAKE
KMLQRIEPWIRRELQAILGDPDPSIIVHVVTSLFISENTHSTQQYAGDDFLAPLRPFLHE
HAEMFWHELRVGM

Transcript Sequence

Gene sequence data has not been registered.